ConjuPepDB Help page

Navigating ConjuPepDB

The ConjuPepDB contains information about drug-peptide conjugates collected from literature. It is designed to be intuitive and user-friendly, with tooltips and help icon. To get help for the specific part click the Help icon which appears next to it. Clicking it will open a popup window with the help messages.

ConjuPepDB has options to browse all the conjugates, or browse by articles. It also allows the user to perform a simple keyword search, and free text search.

Cite ConjuPepDB

Nizami bilal, 2020.

Click here to view the paper: ConjuPepDB paper

Browse Conjugates

This page allow users to browse all the conjugates in a tabulated form. The table is spread over multiple pages, and a specific page can be accessed by clicking in the pagination menu.


Figure 5: ConjuPepDB browse pagination.

The conjugates's table shows the IDs, CAS RN, peptide name, small molecule CAS, type and, reference. The table can be filtered based on the year of publication. Clicking on a specific ID opens the detailed view of a single entry, where further details about it can be found (See ConjuPepDB Conjugate Entry Section and Figure 8).


Figure 6: ConjuPepDB browse all conjugates.

Browse Articles

This page allow users to browse all the articles in the database in a tabulated form. The title of the article, author's name, year of publication, DOI number (open in a new tab), Journal name and, number of records in the articles are shown. The table can be sorted by clicking on the column's heading with ▲/▼ symbol.


Figure 7: ConjuPepDB browse article.

ConjuPepDB Conjugates Entry

This page allow users to access the detailed information on a single drug-peptide conjugate entry. The information in this page is devided into various sections. A molecular structure along with a 3D model of the conjugate is shown at the begining of each page. 3D model is rendered using Jsmol and various control buttons are provided to toggle the different molecular representations (Such as CPK, Ball&Stikc, and Stick etc.). To rotate the model click and hold the left button on the canvas area and move the mouse.


Figure 8: ConjuPepDB Conjugates Entry- Molecular structure and interactive 3D model.

Next sections shows the information related to identifications, external IDs, physico-chemical properties, and bibliography of a single entry.


Figure 9: Various information blocks in the single conjugate entry.


Figure 10: Bibliography.

ConjuPepDB Article Entry

This page shows the details of a single article.

Title: e.g. 'HIV-TAT enhances the transdermal delivery of NSAID drugs from liquid crystalline mesophases'
Authors and journa information: Authors: Cohen-Avrahami, Marganit; Shames, Alexander I; Ottaviani, M Francesca; Aserin, Abraham; Garti, Nissim; The journal of physical chemistry.; (2014); 10.1021/jp412739p
DOI : Link to the extenral full text article.
Year of publication: e.g. 2012
ConjuPepDB article ID: e.g. cpdart0001
PUBMED ID: e.g. 22285548
Conjugates from this article can be browsed by clicking on